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Remove idx from graph construction and marker generation#32

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mxwang66 merged 6 commits into
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noidx
Jun 5, 2026
Merged

Remove idx from graph construction and marker generation#32
mxwang66 merged 6 commits into
mainfrom
noidx

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@mxwang66

@mxwang66 mxwang66 commented Jun 5, 2026

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  • Consecutive k-mers are now determined by genomic positions, not indices.
  • build_worker() now directly groups kmers by hash, and thread-local kmers are merged directly without the help of idx.

@mxwang66 mxwang66 merged commit 812bb38 into main Jun 5, 2026
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@mxwang66 mxwang66 deleted the noidx branch June 5, 2026 05:49
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