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Bump version to 0.3.0 - #49

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jcschaff merged 1 commit into
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bump-0.3.0
Jun 18, 2026
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Bump version to 0.3.0#49
jcschaff merged 1 commit into
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bump-0.3.0

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Version bump to 0.3.0 ahead of the release.

Since 0.2.0 the project gained (PRs #41#48):

  • MathDescription data model exposed in the VCML reader/writer (per-application generated math)
  • Advection velocity on species mappings; add_model_parameter role defaults to "user defined" (matches VCell Java)
  • Lightweight data layer: slim core install + optional-dependency extras (pip install pyvcell[all] for the full stack), lazy (PEP 562) imports
  • Lenient VCML reader: best-effort physiology parse (real-biomodel corpus load 77% → 100%)
  • Volume-variable shape robustness in the zarr writer; libvcell>=0.0.15.3
  • Maintenance: dropped Python 3.9/3.10/3.11 from CI (requires-python >=3.12), removed poetry

The release workflow sets the published version from the release tag, but this keeps the in-repo pyproject.toml / uv.lock in sync.

🤖 Generated with Claude Code

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
@jcschaff
jcschaff merged commit a354aa2 into main Jun 18, 2026
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@jcschaff
jcschaff deleted the bump-0.3.0 branch June 18, 2026 04:19
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