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1. Biolab-mcp-server Biolab-mcp-server Public

   Hash-chained MCP server for auditable biological database queries — PubMed, Europe PMC, ClinicalTrials.gov, bioRxiv/medRxiv. Live, free to use, zero install.

   Python

2. Flowcast Flowcast Public

   Go CLI that diagnoses nf-core/rnaseq pipeline runs — rule-based classifier + LLM narrator that tags every claim Observed/Reported/Unknown, never a guessed root cause.

   Go

3. metalsw metalsw Public

   Exact Smith-Waterman protein database search on Apple Silicon GPU via Metal

   C++

4. CellForge CellForge Public

   Reproducible benchmarking harness for virtual-cell and single-cell perturbation models

   Python

5. concordia concordia Public

   An audit layer for AI-generated biology: records which model and input produced a structure or sequence claim, tests it against independent evidence, and makes the analysis replayable.

   Python

6. GlucoPulse GlucoPulse Public

   Real-time CGM streaming pipeline: Kafka → TimescaleDB → PySpark → Temporal Fusion Transformer → ONNX/FastAPI. Glucose forecasting measured against a persistence baseline, not assumed.

   Python