Segmentation features needed for intracranial mask computation#46

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cdaversin wants to merge 28 commits intomainfrom

cecile/segmentation_refinement

Commits on Apr 23, 2026

Implement segmentation refinement as in gMRI2FEM and csf segmentation, to be used in intracranial mask computation
cdaversin
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[pre-commit.ci] auto fixes from pre-commit.com hooks
pre-commit-ci[bot]
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Add missing files in test_data
cdaversin
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Merge branch 'cecile/segmentation_refinement' of https://github.com/scientificcomputing/mri-toolkit into cecile/segmentation_refinement
cdaversin
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[pre-commit.ci] auto fixes from pre-commit.com hooks
pre-commit-ci[bot]
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Minor - removed unused file in test
cdaversin
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Fix mypy - convert MRIData to Segmentation type
cdaversin
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[pre-commit.ci] auto fixes from pre-commit.com hooks
pre-commit-ci[bot]
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Reset cache for data
finsberg
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Commits on Apr 24, 2026

Commits on Apr 25, 2026