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    37 repositories

    • DextraDemixer

      Public
      pMHC dextramer deconvolution model
      Jupyter Notebook
      •
      BSD 3-Clause "New" or "Revised" License
      •0•3•0•0•Updated Sep 1, 2026Sep 1, 2026

    • CovidVac_CD4

      Public
      Jupyter Notebook
      •0•0•0•0•Updated Aug 17, 2026Aug 17, 2026

    • mc-needle-student

      Public
      Python
      •0•0•0•0•Updated Aug 4, 2026Aug 4, 2026

    • DextraDemixer_reproducibility

      Public
      Jupyter Notebook
      •
      BSD 3-Clause "New" or "Revised" License
      •0•0•0•0•Updated Jun 23, 2026Jun 23, 2026

    • cmsb26_project7

      Public
      Computational Single-cell Lecture 25/26 Project 7
      Jupyter Notebook
      •
      BSD 3-Clause "New" or "Revised" License
      •1•0•0•0•Updated Mar 15, 2026Mar 15, 2026

    • biofluid_colorimetric_sensors

      Public
      Jupyter Notebook
      •
      MIT License
      •0•1•0•0•Updated Feb 16, 2026Feb 16, 2026

    • epytope

      Public
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •2•25•0•0•Updated Dec 5, 2025Dec 5, 2025

    • benchmark_TCRprediction

      Public
      Jupyter Notebook
      •0•6•0•0•Updated Dec 5, 2025Dec 5, 2025

    • neonatal_video_heart_rate

      Public
      Deep learning pipeline for video-based heart rate prediction in neonates, leveraging signals from multiple body regions.
      Python
      •
      MIT License
      •0•0•0•0•Updated Aug 20, 2025Aug 20, 2025

    • nasal_cytokines

      Public
      Biomarkers from nasal cytokines for asthmatic adult patients
      R
      •0•0•0•0•Updated Jul 21, 2025Jul 21, 2025

    • CovidVac_CD8

      Public
      Jupyter Notebook
      •0•1•0•0•Updated Jun 18, 2025Jun 18, 2025

    • CAR_tcell_study

      Public
      Jupyter Notebook
      •0•1•0•0•Updated May 7, 2025May 7, 2025

    • star-track-webfrontend

      Public
      frontend development
      HTML
      •0•0•0•0•Updated Mar 31, 2025Mar 31, 2025

    • star-track

      Public
      Java
      •0•0•0•0•Updated Mar 31, 2025Mar 31, 2025

    • VaccineSimulator

      Public
      Project for the 2024-2025 single cell lecture at TUM, where we will predict vaccination response of individual clones using temporal multimodal single cell data…
      Jupyter Notebook
      •0•0•0•0•Updated Mar 17, 2025Mar 17, 2025

    • tregcommons_frontent

      Public template
      Gen3 Data Commons template repository for gen3 frontend framework
      TypeScript
      •
      Apache License 2.0
      •42•0•0•0•Updated Dec 4, 2024Dec 4, 2024

    • mvTCR

      Public
      Jupyter Notebook
      •
      MIT License
      •10•60•1•0•Updated Nov 1, 2024Nov 1, 2024

    • TcrPrediction_MutatedAPLs

      Public
      Jupyter Notebook
      •
      Other
      •3•2•0•0•Updated May 15, 2024May 15, 2024

    • mvTCR_reproducibility

      Public
      Reproducibility Repo for mvTCR paper
      Jupyter Notebook
      •
      MIT License
      •3•14•2•0•Updated Apr 2, 2024Apr 2, 2024

    • CovidVac_HIM

      Public
      scRNA + scTCR analysis of patients after SARS-CoV-2 vaccination
      Jupyter Notebook
      •
      Other
      •0•2•0•0•Updated Mar 12, 2024Mar 12, 2024

    • NeoLUNet

      Public
      Project for Neonatal MRI Lung Segmentation with U-Nets
      Jupyter Notebook
      •
      Other
      •3•4•0•0•Updated Feb 21, 2024Feb 21, 2024

    • cell_cycle_arrest

      Public
      Scripts used in the paper "Hyperoxia-induced cell cycle arrest drives long-term impairment of lung development and DNA repair in neonates"
      R
      •0•0•0•0•Updated Jul 11, 2023Jul 11, 2023

    • GeneralizedEvDesign

      Public
      General graph-based design of Epitope Vaccines
      Python
      •
      MIT License
      •1•4•0•0•Updated Feb 21, 2023Feb 21, 2023

    • colorimetric_sensor_reading

      Public
      Methods for automated digital reading of colorimetric sensors in settings with perturbed illumination conditions and low image-resolutions
      Python
      •
      MIT License
      •0•1•0•0•Updated Feb 16, 2023Feb 16, 2023

    • proteasomal-cleavage-puupl

      Public
      Improved proteasomal cleavage prediction with positive-unlabeled learning
      Python
      •
      MIT License
      •0•2•0•0•Updated Oct 24, 2022Oct 24, 2022

    • meTCRs

      Public
      Python
      •0•1•0•0•Updated Aug 25, 2022Aug 25, 2022

    • BEAR

      Public
      This repository is for the paper "A generative nonparametric Bayesian model for whole genomes"
      Python
      •
      MIT License
      •4•0•0•0•Updated Jun 13, 2022Jun 13, 2022

    • thymusTCRs

      Public
      Jupyter Notebook
      •0•1•0•0•Updated Mar 11, 2022Mar 11, 2022

    • ciliated_cells_video_analysis

      Public
      Frequency Analysis of ciliated cell videos
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Jan 10, 2022Jan 10, 2022

    • Topics_in_Computational_Biology

      Public
      Lecture materials for Topics in Computational Biology TU Munich
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •1•0•0•0•Updated Jan 5, 2022Jan 5, 2022
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