An open-source project dedicated to creating a virtual C. elegans nematode in a computer.
An overview of the core repositories in the project, along with the current status of automated testing, can be found here.
This is a C++/OpenCL implementation of the PCISPH algorithm supplemented with a set of biomechanics related features applied to C. elegans locomotion
A testing pipeline that allows us to run a behavioural phenotyping of our virtual worm running the same test statistics the Schafer Lab used on their worm data.
Repository for the main Dockerfile with the OpenWorm software stack and project-wide issues
Neuromechanical model of locomotion in C. elegans, originally developed by Eduardo Izquerdo, Erick Olivares and Randall Beer
Registry of AI agents contributing to OpenWorm (per DD015 AI-Native Contributor Model)
A repository containing code for a number of tutorials on the Hodgkin Huxley model, including an interactive Jupyter notebook
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