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Co-authored-by: pwalczysko <p.walczysko@dundee.ac.uk>
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@jburel Could you have a look please ? I cannot add you as a reviewer on this repo, thank you. |
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jburel
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Apr 13, 2026
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@pwalczysko one of the links is not correct. Suggestion made |
Co-authored-by: jean-marie burel <j.burel@dundee.ac.uk>
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@jburel thanks for catching that, commited the fix |
kbab
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Apr 13, 2026
| "\n", | ||
| "Using ome-zarr for both IDR and BIA allows us to use the same analytical pipeline on data stored in two different resources.\n", | ||
| "We will run Cellpose against an [image](https://uk1s3.embassy.ebi.ac.uk/bia-integrator-data/pages/S-BIAD338/804b2976-1111-4099-8bfc-21d1d1d2163c.html) in BIA associated with the study with accession number [S-BIAD338]( https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD338)" | ||
| "We will run Cellpose against an [image](https://livingobjects.ebi.ac.uk/bia-integrator-data/pages/S-BIAD338/804b2976-1111-4099-8bfc-21d1d1d2163c.html) in BIA associated with the study with accession number [S-BIAD338]( https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD338)" |
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url should be: image (i.e. bia -> bioimaging)
kbab
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Apr 13, 2026
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There is one instance of bia-integrator-data that needs to be changed to bioimaging-integrator-data
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@jburel Do you want to merge please ? |
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This PR is on top of #4
the missing fixes on #4 were connected with
xxx-integrator-xxx.The fixes are implemented here as per recommendations of @kbab on ome/ngff#497 (comment), thank you
cc @jburel @will-moore