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Merge branch 'dev' into fix_meta_comments

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Create a pipeline and test it on: pull_request

RunTestWorkflow (25.10.4)

RunTestWorkflow (latest-everything)

Lint tools code formatting on: pull_request

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Python tests on: pull_request 5

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Run test_datasets/test_test_datasets_search.py with Python 3.10 and Nextflow 25.10.4

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Run test_cli.py with Python 3.10 and Nextflow 25.10.4

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Run test_modules.py with Python 3.10 and Nextflow 25.10.4

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Run modules/lint/test_module_changes.py with Python 3.10 and Nextflow 25.10.4

Run modules/lint/test_meta_yml.py with Python 3.10 and Nextflow 25.10.4

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Run pipelines/lint/test_nextflow_config.py with Python 3.10 and Nextflow 25.10.4

Run pipelines/lint/test_files_unchanged.py with Python 3.10 and Nextflow 25.10.4

Run pipelines/lint/test_template_strings.py with Python 3.10 and Nextflow 25.10.4

Run pipelines/lint/test_local_component_structure.py with Python 3.10 and Nextflow 25.10.4

Run pipelines/lint/test_rocrate_readme_sync.py with Python 3.10 and Nextflow 25.10.4

Run pipelines/lint/test_if_empty_null.py with Python 3.10 and Nextflow 25.10.4

Run pipelines/lint/test_container_configs.py with Python 3.10 and Nextflow 25.10.4

Run pipelines/lint/test_actions_nf_test.py with Python 3.10 and Nextflow 25.10.4

Run pipelines/lint/test_multiqc_config.py with Python 3.10 and Nextflow 25.10.4

Run test_subworkflows.py with Python 3.10 and Nextflow 25.10.4

Run subworkflows/test_list.py with Python 3.10 and Nextflow 25.10.4

Run subworkflows/test_update.py with Python 3.10 and Nextflow 25.10.4

Run subworkflows/test_create.py with Python 3.10 and Nextflow 25.10.4

Run subworkflows/test_patch.py with Python 3.10 and Nextflow 25.10.4

Run subworkflows/test_info.py with Python 3.10 and Nextflow 25.10.4

Run subworkflows/test_install.py with Python 3.10 and Nextflow 25.10.4

Run subworkflows/test_remove.py with Python 3.10 and Nextflow 25.10.4

Run subworkflows/lint/test_integration.py with Python 3.10 and Nextflow 25.10.4

Run subworkflows/lint/test_nf_test.py with Python 3.10 and Nextflow 25.10.4

Run subworkflows/lint/test_local.py with Python 3.10 and Nextflow 25.10.4

Run subworkflows/lint/test_main_nf.py with Python 3.10 and Nextflow 25.10.4

Run subworkflows/lint/test_patch.py with Python 3.10 and Nextflow 25.10.4

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