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8 changes: 6 additions & 2 deletions .github/workflows/rebuild-hmpxv1-big.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -50,12 +50,16 @@ jobs:
SLACK_CHANNELS: ${{ inputs.trial_name && vars.TEST_SLACK_CHANNEL || vars.SLACK_CHANNELS }}
BUILD_DIR: phylogenetic
BUILD_NAME: hmpxv1_big
# Aiming to use c7a.8xlarge instances since previous runs with c7a.4xlarge
# failed with OOM error. Note c7a.8xlarge is the largest instance allowed
# for the default nextstrain-job-queue. If this needs more memory,
# consider adding a separate job queue for larger instances.
run: |
nextstrain build \
--detach \
--no-download \
--cpus 16 \
--memory 28GiB \
--cpus 32 \
--memory 60GiB \
--env GITHUB_RUN_ID \
--env SLACK_TOKEN \
--env SLACK_CHANNELS \
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6 changes: 4 additions & 2 deletions .github/workflows/rebuild-hmpxv1.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -50,12 +50,14 @@ jobs:
SLACK_CHANNELS: ${{ inputs.trial_name && vars.TEST_SLACK_CHANNEL || vars.SLACK_CHANNELS }}
BUILD_DIR: phylogenetic
BUILD_NAME: hmpxv1
# Aiming for c7a.xlarge instances since previous run with c7a.large failed
# with OOM error.
run: |
nextstrain build \
--detach \
--no-download \
--cpus 2 \
--memory 4GiB \
--cpus 4 \
--memory 7GiB \
--env GITHUB_RUN_ID \
--env SLACK_TOKEN \
--env SLACK_CHANNELS \
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6 changes: 4 additions & 2 deletions .github/workflows/rebuild-mpxv.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -50,12 +50,14 @@ jobs:
SLACK_CHANNELS: ${{ inputs.trial_name && vars.TEST_SLACK_CHANNEL || vars.SLACK_CHANNELS }}
BUILD_DIR: phylogenetic
BUILD_NAME: mpxv
# Aiming for c7a.2xlarge instances since previous run with c7a.xlarge
# failed with OOM error.
run: |
nextstrain build \
--detach \
--no-download \
--cpus 2 \
--memory 4GiB \
--cpus 8 \
--memory 14GiB \
--env GITHUB_RUN_ID \
--env SLACK_TOKEN \
--env SLACK_CHANNELS \
Expand Down