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Contributor submission PumK #209

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Merged
mmzdouc merged 7 commits into from
Feb 27, 2026
Merged

Contributor submission PumK #209

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fec7199
Add submission UUID file
mite-bot Feb 27, 2026
647aeff
Update entry MITE0000098
mite-bot Feb 27, 2026
2086b8a
Update submission
mite-bot Feb 27, 2026
e74b033
Update submission
mite-bot Feb 27, 2026
065fa84
Delete mite_data/data/fec357fc-13b5-11f1-8244-9f391af45cf2.json
mite-bot Feb 27, 2026
6af5f8f
Update submission
mite-bot Feb 27, 2026
a40da26
Update MITE0000098.json
mmzdouc Feb 27, 2026
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20 changes: 16 additions & 4 deletions mite_data/data/MITE0000098.json
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Original file line number Diff line number Diff line change
Expand Up @@ -37,6 +37,17 @@
"0000-0001-6534-6609"
],
"comment": "Replaced retired UniProtKB ID with UniParc ID"
},
{
"version": "4",
"date": "2026-02-27",
"contributors": [
"AAAAAAAAAAAAAAAAAAAAAAAA"
],
"reviewers": [
"0000-0001-6534-6609"
],
"comment": "Added reaction description. Reviewer 1 removed MIBIG ID BGC0001476 (does not exist in MIBiG 4.0)"
}
],
"enzyme": {
Expand All @@ -47,23 +58,24 @@
],
"databaseIds": {
"uniprot": "UPI000D1FFAB8",
"genpept": "AVT42380.1",
"mibig": "BGC0001476"
"genpept": "AVT42380.1"
}
},
"reactions": [
{
"tailoring": [
"Other"
],
"description": "Transfers glutamine to 5'-aminopseudouridine in pseudouridimycin pathway.",
"reactionSMARTS": "[#7:1]-[#6:2]/[#6@@:3]1-[#6@@:8](\\[#8:9])-[#6@@:6](\\[#8:7])-[#6@:5](/[#6:10]2:[#6:16](=[#8:17]):[#7:15]:[#6:13](=[#8:14]):[#7:12]:[#6:11]:2)-[#8:4]-1>>[#7]\\[#6@](-[#6](-[#7:1]-[#6:2]/[#6@@:3]1-[#6@@:8](\\[#8:9])-[#6@@:6](\\[#8:7])-[#6@:5](/[#6:10]2:[#6:16](=[#8:17]):[#7:15]:[#6:13](=[#8:14]):[#7:12]:[#6:11]:2)-[#8:4]-1)=[#8])-[#6]-[#6]-[#6](=[#8])-[#7]",
"reactions": [
{
"substrate": "NC[C@H]1O[C@@H](c2c[nH]c(=O)[nH]c2=O)[C@H](O)[C@@H]1O",
"products": [
"NC(=O)CC[C@H](N)C(=O)NC[C@H]1O[C@@H](c2c[nH]c(=O)[nH]c2=O)[C@H](O)[C@@H]1O"
],
"isIntermediate": false
"isIntermediate": true,
"description": "Converts 5'-aminopseudouridine to glutamine-5'-aminopseudouridine"
}
],
"evidence": {
Expand All @@ -76,4 +88,4 @@
}
}
]
}
}