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22 changes: 11 additions & 11 deletions communities/biodiversity/lab/sections/2_tools.yml
Original file line number Diff line number Diff line change
@@ -1,17 +1,6 @@
id: tools
title: Tools
tabs:
- id: more_tools
title: More tools !
heading_md: Request a new tools or look at the complete list
content:
- title_md: Request a new tool or installation of tool
description_md: If one of the tools listed here can not be open, it means it
is not installed on this server. Please contact the <a href="{{ support
}}">support</a>.
- title_md: See the complete tool list
description_md: Our comprehensive curated tool list is available via <a
href="https://galaxyproject.github.io/galaxy_codex/communities/biodiversity/resources/">https://galaxyproject.github.io/galaxy_codex/communities/biodiversity/resources/</a>.
- id: de-novo_assembly
title: De-novo assembly
heading_md: 'Top 10 most used tools* for the EDAM operation: De-novo assembly <br>
Expand Down Expand Up @@ -400,3 +389,14 @@ tabs:
<li><a href="{{ galaxy_base_url }}/?tool_id=fastk_histex">fastk_histex</a></li>
<li><a href="{{ galaxy_base_url }}/?tool_id=fastk_logex">fastk_logex</a></li>
</ul>
- id: request_tools
title: Request tools
heading_md: Request a new tools or look at the complete list
content:
- title_md: Request a new tool or installation of tool
description_md: If one of the tools listed here can not be open, it means it
is not installed on this server. Please contact the <a href="{{ support
}}">support</a>.
- title_md: See the complete tool list
description_md: Our comprehensive curated tool list is available via <a
href="https://galaxyproject.github.io/galaxy_codex/communities/biodiversity/resources/">https://galaxyproject.github.io/galaxy_codex/communities/biodiversity/resources/</a>.
6 changes: 3 additions & 3 deletions communities/biodiversity/lab/sections/4_tutorials.yml
Original file line number Diff line number Diff line change
Expand Up @@ -3,7 +3,7 @@ title: Tutorials
tabs:
- id: assembly
title: Assembly
heading_md: 'Top 10 most visited tutorials for the Topic : Assembly'
heading_md: 'Top 10 most visited tutorials for the Topic : Assembly. <br/> Visitors : Number of unique visitors automatically calculated using Plausible.'
content:
- title_md: "Unicycler Assembly\n (Visitors: 3594287)"
description_md: Tutorial stored in Assembly topic on the Galaxy Training
Expand Down Expand Up @@ -88,7 +88,7 @@ tabs:
button_icon: tutorial
- id: ecology
title: Ecology
heading_md: 'Top 10 most visited tutorials for the Topic : Ecology'
heading_md: 'Top 10 most visited tutorials for the Topic : Ecology. <br/> Visitors : Number of unique visitors automatically calculated using Plausible.'
content:
- title_md: "Metabarcoding/eDNA through Obitools\n (Visitors: 4791)"
description_md: Tutorial stored in Ecology topic on the Galaxy Training
Expand Down Expand Up @@ -163,7 +163,7 @@ tabs:
button_icon: tutorial
- id: genome_annotation
title: Genome Annotation
heading_md: 'Top 10 most visited tutorials for the Topic : Genome Annotation'
heading_md: 'Top 10 most visited tutorials for the Topic : Genome Annotation. <br/> Visitors : Number of unique visitors automatically calculated using Plausible.'
content:
- title_md: "Refining Genome Annotations with Apollo (prokaryotes)\n (Visitors:
3356097)"
Expand Down
26 changes: 13 additions & 13 deletions communities/microgalaxy/lab/sections/4_tools.yml
Original file line number Diff line number Diff line change
@@ -1,19 +1,6 @@
id: tools
title: Community curated tools
tabs:
- id: more_tools
title: More tools !
heading_md: Request a new tools or look at the complete list
content:
- title_md: Request a new tool or installation of tool
description_md: "If one of the tools listed here can not be open, it means it
is not installed on this server. Please contact the <a href=\"{{ support }}\"\
>support</a>.\n If the tool is not listed here, you can request
it by contacting the microGalaxy community: <a href=\"mailto:microgalaxy@lists.galaxyproject.org\"\
>microgalaxy@lists.galaxyproject.org</a>"
- title_md: See the complete tool list
description_md: Our comprehensive curated tool list is available via <a
href="https://galaxyproject.github.io/galaxy_codex/communities/microgalaxy/resources/">https://galaxyproject.github.io/galaxy_codex/communities/microgalaxy/resources/</a>.
- id: antimicrobial_resistance_prediction
title: Antimicrobial resistance prediction
heading_md: 'Top 10 most used tools* for the EDAM operation: Antimicrobial resistance
Expand Down Expand Up @@ -1072,3 +1059,16 @@ tabs:
<li><a href="{{ galaxy_base_url }}/?tool_id=phyloseq_plot_richness">phyloseq_plot_richness</a></li>
<li><a href="{{ galaxy_base_url }}/?tool_id=phyloseq_tax_glom">phyloseq_tax_glom</a></li>
</ul>
- id: request_tools
title: Request tools
heading_md: Request a new tools or look at the complete list
content:
- title_md: Request a new tool or installation of tool
description_md: "If one of the tools listed here can not be open, it means it
is not installed on this server. Please contact the <a href=\"{{ support }}\"\
>support</a>.\n If the tool is not listed here, you can request
it by contacting the microGalaxy community: <a href=\"mailto:microgalaxy@lists.galaxyproject.org\"\
>microgalaxy@lists.galaxyproject.org</a>"
- title_md: See the complete tool list
description_md: Our comprehensive curated tool list is available via <a
href="https://galaxyproject.github.io/galaxy_codex/communities/microgalaxy/resources/">https://galaxyproject.github.io/galaxy_codex/communities/microgalaxy/resources/</a>.
2 changes: 1 addition & 1 deletion sources/bin/extract_galaxy_tools.py
Original file line number Diff line number Diff line change
Expand Up @@ -955,7 +955,7 @@ def fill_lab_tool_section(
"""
tabs = []
for element in lab_section["tabs"]:
if element["id"] == "more_tools":
if element["id"] == "request_tools":
tabs.append(element)

for grp_id, group in top_items_per_category.groupby("Category"):
Expand Down
2 changes: 1 addition & 1 deletion sources/bin/extract_gtn_tutorials.py
Original file line number Diff line number Diff line change
Expand Up @@ -377,7 +377,7 @@ def fill_lab_tutorial_section(
{
"id": group_id.replace(" ", "_").lower(),
"title": group_id,
"heading_md": f"Top 10 most visited tutorials for the Topic : {group_id}",
"heading_md": f"Top 10 most visited tutorials for the Topic : {group_id}. <br/> Visitors : Number of unique visitors automatically calculated using Plausible.",
"content": tutorial_entries,
}
)
Expand Down
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