Add bulk metadata exports: listing endpoint, DRS objects, downloads page - #278
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nsheff wants to merge 25 commits into
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Add bulk metadata exports: listing endpoint, DRS objects, downloads page#278nsheff wants to merge 25 commits into
nsheff wants to merge 25 commits into
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Migrate to Starlette 1.0
Co-authored-by: Copilot <175728472+Copilot@users.noreply.github.com>
Co-authored-by: Copilot <175728472+Copilot@users.noreply.github.com>
Co-authored-by: Copilot <175728472+Copilot@users.noreply.github.com>
SQLAlchemy queries plus numpy work, which would otherwise stall the event loop (and every other request) for the full duration. FastAPI dispatches plain def handlers to a thread pool instead.
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Makes the new bulk metadata exports discoverable through the BEDbase API and UI.
GET /v1/bed/exports— lists the published export files, newest first, with direct download URLs.GET /v1/objects/exportsand/exports/{id}), so they're reachable through the standard GA4GH data-access API too./downloads) listing each snapshot's files with sizes, checksums, and a copy-paste DuckDB query.data2.bedbase.org) directly, which is what DuckDB needs.Note: depends on the bbconf 0.14.13 release being published first.