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PyEBSDIndex 0.3.9 release - #74

Merged

drowenhorst-nrl merged 103 commits into

USNavalResearchLaboratory:mainfrom

drowenhorst-nrl:develop

Jan 26, 2026

Commits on Oct 17, 2024
- Initial attempt at including diffusion
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Commits on Oct 22, 2024
- First attempt to add a scale bar to ipf images
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- Set diffusion offset to be a scalar added to the center weighted kernel.
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- Include basic font in manifest
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Commits on Oct 23, 2024
- Attempt to fix manifest
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- Some improvements to scalebar attachment.
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Commits on Oct 24, 2024
Commits on Oct 29, 2024
- Another code rearrangement and some documentation.
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- Change behavior for norescale if no scale bar.
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Commits on Oct 30, 2024
- Added grayscale option to IPF maps.
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- More pleasing contrast for fitinv.
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- Clean up some code.
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Commits on Oct 31, 2024
- Changed upscale_xsize --> zoom_xsize. Added zoom_kwargs.
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- Refactor to micronbar to avoid confusion with matplotlib_scalebar package.
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- Fix PQ
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  55e2165
- Updated CL programs for new PQ metric.
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- Try and correct a rare divide by 0
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Commits on Nov 1, 2024
- Fix bandindex arrays
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- Improved QUEST weighting.
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- Gamma function for images.
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- More consistent scaling for PQ value.
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- Better automated CPU allocation.
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Commits on Nov 4, 2024
- Fixed pole assignment issue
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  98b80e8
- Fixed array indexing issue.
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- Using un-weighted fit.
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- Another rare exception caught.
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- Update tutorial for indexing. Introduced the IQ metric.
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Commits on Nov 5, 2024
- Fixed array slicing on CPU band detection.
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- Fixed keeping pattern mask with indexer object.
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Commits on Nov 27, 2024
- Start Adding DM5 file type.
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Commits on Dec 5, 2024
- Fix numba typing error
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- Merge branch 'develop' into nlstem
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Commits on Dec 6, 2024
- Suppress bogus warnings on NVIDIA Opencl
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- Fix for Windows needing integer valued font size.
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- Keep from resetting warnings
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Commits on Dec 9, 2024
- Merge branch 'develop' into nlstem
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- Better warning handling around OpenCL builds.
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  a934022
- Better warning handling around OpenCL builds.
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- Merge branch 'develop' into nlstem
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Commits on Dec 12, 2024
- First attempt at NLPAR for 4D STEM.
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Commits on Dec 13, 2024
- Default oh5 files to OIM 9.1 specification.
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- Default oh5 to OIM 8.6 spec, 9.1 spec enabled with version='9.1'
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Commits on Feb 3, 2025
- Merge branch 'develop' into nlstem
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  a65a1ae
- Update tests to oldest python 3.8
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Commits on Feb 6, 2025
- Added SpaceGroupNumber to oh5 metadata
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- Add helper functions for when no opencl is found.
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  6e4e850
- Update tests to oldest python 3.8
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  2b4c398
- Added SpaceGroupNumber to oh5 metadata
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- Merge branch 'develop' into nlstem
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Commits on Apr 1, 2025
- Merge branch 'develop' into nlstem
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Commits on Apr 10, 2025
- Slightly improved error handling if things go very wrong.
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Commits on May 16, 2025
- Preliminary support for version 6 ebsp files.
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Commits on Jul 21, 2025
- Allow for PC to be an array of values, one for each pattern to be indexed.
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Commits on Aug 4, 2025
- Set up kernel object reuse - should be more efficient, and eliminate warnings
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Commits on Aug 12, 2025
- Bump actions/checkout from 4 to 5
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Commits on Sep 8, 2025
- Bump actions/setup-python from 5 to 6
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Commits on Oct 1, 2025
Commits on Oct 2, 2025
- Fixed issue that prevented autonlpar from using user defined lambda.
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Commits on Oct 10, 2025
- Fixed bug in reading step size in ebsp files.
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Commits on Nov 18, 2025
- Merge develop
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- Include helper functions
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- Finish merge with develop
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Commits on Nov 19, 2025
- Begin block cpu NLPAR
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- Continuing interrupted merge from develop
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  7e9ff54
- calcnlpar_cpu now block chunked
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- Check point
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Commits on Nov 20, 2025
- Moved sigma calculation (and also lambda optimization) to block-based chunks vs. row based.
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Commits on Nov 21, 2025
- Merge branch 'blocknlpar' into mergenlstemblock
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- More consistent return format.
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- Merge branch 'blocknlpar' into mergenlstemblock
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Commits on Nov 24, 2025
- Bump actions/checkout from 5 to 6
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- Adjusted stem_scale scaling to sqrt() [not log()]. Corrected method inheritance issues.
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  37b9d38
- Decide on best NLPAR version on import.
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- Better flexibility on choosing NLPAR implementation.
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Commits on Nov 25, 2025
- Checkpoint
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- Checkpoint
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- Checkpoint
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Commits on Nov 26, 2025
- Checkpoint
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- Checkpoint
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Commits on Dec 2, 2025
- Removed alternate sigma calculation. That effort is stored on NLPAR2 branch.
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Commits on Dec 4, 2025
- Significant code clean-up, removing redundant keywords within NLPAR.
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- Merge branch 'mergenlstemblock' into blocknlpar
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- Merge branch 'mergenlstemblock' into develop
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Commits on Dec 5, 2025
- First steps to numba parallel
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Commits on Dec 6, 2025
- Appears to be working - numba multi-threading
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- Checkpoint
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- Checkpoint
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Commits on Dec 8, 2025
- Adjust multiprocessor settings. Add addphaselist method.
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  2e63e46
- SubPrograms in triplevote to assist numba parallel.
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  5e3e1d3
- Changing multiprocessing optimal values for number of indexing processes.
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  46460fe
- Upped max number of patterns per chunk in distributed indexing.
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Commits on Dec 9, 2025
- More scheduling adjustments.
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Commits on Dec 11, 2025
- Final performance tweaking ... for now.
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  51c394c
- removed unused attribute phaseName (was actually using phasename)
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  b0ed820
- Beginning of a pyebsdindex save/restore.
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Commits on Dec 12, 2025
- First attempt at a indexer file save.
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Commits on Jan 26, 2026
- Small bug fixes to allow for saving indexer object in an HDF5
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  79688ef
- Prepare for 0.3.9 release
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