Feature seurat upload#1273
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Create SeuratUploader, now adding functions for reduction to metadata and layer_to_X
Add functionality for SeuratUpload
seurat5 httpuv hdf5r rhdf5 anndataR
adkinsrs
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Jun 3, 2026
…b/gear files to be uniform
…scripts - Updated exception handling to specify Exception in r_package_importer and seurat_to_anndata functions. - Added RDS file migration support in finalize_uploaded_expression_dataset.cgi. - Changed form parameter retrieval method to getfirst in process_uploaded_expression_dataset.cgi and store_expression_dataset.cgi for consistency. - Added validation for RDS file extension in store_expression_dataset.cgi.
…g in process_seurat function
adkinsrs
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Jun 4, 2026
adkinsrs
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I committed various changes, so for this particular review request I am just going to mark it as "request changes" since that was what was needed.
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Converted the pull request into a draft, as @dlesper needs to add a retry request mechanism to the MyGene call to address intermittent 500-level responses. |
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Seurat Uploader