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Remove conda and miniforge instructions - #18

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Sep 9, 2026
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stellaprins merged 1 commit into
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This PR updates workshop setup instructions to use uv consistently by removing Miniforge/Anaconda-specific guidance. (conda deactivation comment is kept).

Closes #17

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github-actions Bot commented Sep 9, 2026 •

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Thank you!

Thank you for your pull request 😃

🤖 This automated message can help you check the rendered files in your submission for clarity. If you have any questions, please feel free to open an issue in {sandpaper}.

If you have files that automatically render output (e.g. R Markdown), then you should check for the following:

  • 🎯 correct output
  • 🖼️ correct figures
  • ❓ new warnings
  • ‼️ new errors

Rendered Changes

🔍 Inspect the changes: https://github.com/HealthBioscienceIDEAS/napari-taster-aicatalyst/compare/md-outputs..md-outputs-PR-18

The following changes were observed in the rendered markdown documents:

 config.yaml (new) | 92 +++++++++++++++++++++++++++++++++++++++++++++++++++++++
 md5sum.txt        |  2 +-
 setup.md          |  7 +----
 3 files changed, 94 insertions(+), 7 deletions(-)
What does this mean?

If you have source files that require output and figures to be generated (e.g. R Markdown), then it is important to make sure the generated figures and output are reproducible.

This output provides a way for you to inspect the output in a diff-friendly manner so that it's easy to see the changes that occur due to new software versions or randomisation.

⏱️ Updated at 2026-09-09 10:31:38 +0000

@davecash75 davecash75 left a comment

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Well spotted! Thought I caught all of those guys, but this makes more sense.

@stellaprins
stellaprins merged commit 5fceaaf into main Sep 9, 2026
5 checks passed
github-actions Bot pushed a commit that referenced this pull request Sep 9, 2026
Auto-generated via `{sandpaper}`
Source  : 5fceaaf
Branch  : main
Author  : Stella Prins <30465823+stellaprins@users.noreply.github.com>
Time    : 2026-09-09 11:37:50 +0000
Message : Merge pull request #18 from HealthBioscienceIDEAS/sp/17-uv_setup_instructions

Remove conda and miniforge instructions
github-actions Bot pushed a commit that referenced this pull request Sep 9, 2026
Auto-generated via `{sandpaper}`
Source  : a1a44bf
Branch  : md-outputs
Author  : GitHub Actions <actions@github.com>
Time    : 2026-09-09 11:41:02 +0000
Message : markdown source builds

Auto-generated via `{sandpaper}`
Source  : 5fceaaf
Branch  : main
Author  : Stella Prins <30465823+stellaprins@users.noreply.github.com>
Time    : 2026-09-09 11:37:50 +0000
Message : Merge pull request #18 from HealthBioscienceIDEAS/sp/17-uv_setup_instructions

Remove conda and miniforge instructions
github-actions Bot pushed a commit that referenced this pull request Sep 15, 2026
Auto-generated via `{sandpaper}`
Source  : 5fceaaf
Branch  : main
Author  : Stella Prins <30465823+stellaprins@users.noreply.github.com>
Time    : 2026-09-09 11:37:50 +0000
Message : Merge pull request #18 from HealthBioscienceIDEAS/sp/17-uv_setup_instructions

Remove conda and miniforge instructions
github-actions Bot pushed a commit that referenced this pull request Sep 15, 2026
Auto-generated via `{sandpaper}`
Source  : 52ff8f1
Branch  : md-outputs
Author  : GitHub Actions <actions@github.com>
Time    : 2026-09-15 00:20:12 +0000
Message : markdown source builds

Auto-generated via `{sandpaper}`
Source  : 5fceaaf
Branch  : main
Author  : Stella Prins <30465823+stellaprins@users.noreply.github.com>
Time    : 2026-09-09 11:37:50 +0000
Message : Merge pull request #18 from HealthBioscienceIDEAS/sp/17-uv_setup_instructions

Remove conda and miniforge instructions
github-actions Bot pushed a commit that referenced this pull request Sep 22, 2026
Auto-generated via `{sandpaper}`
Source  : 5fceaaf
Branch  : main
Author  : Stella Prins <30465823+stellaprins@users.noreply.github.com>
Time    : 2026-09-09 11:37:50 +0000
Message : Merge pull request #18 from HealthBioscienceIDEAS/sp/17-uv_setup_instructions

Remove conda and miniforge instructions
github-actions Bot pushed a commit that referenced this pull request Sep 22, 2026
Auto-generated via `{sandpaper}`
Source  : caab7bd
Branch  : md-outputs
Author  : GitHub Actions <actions@github.com>
Time    : 2026-09-22 00:19:25 +0000
Message : markdown source builds

Auto-generated via `{sandpaper}`
Source  : 5fceaaf
Branch  : main
Author  : Stella Prins <30465823+stellaprins@users.noreply.github.com>
Time    : 2026-09-09 11:37:50 +0000
Message : Merge pull request #18 from HealthBioscienceIDEAS/sp/17-uv_setup_instructions

Remove conda and miniforge instructions
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setup instructions miniforge reference

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