Skip to content

Fhir 57953 #121

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Open
khalifa-aly wants to merge 5 commits into
base: master
Choose a base branch
from
+3 −1
Open

Fhir 57953 #121

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
5 commits
Select commit Hold shift + click to select a range
584836b
Add SpecimenAssessedReference extension
khalifa-aly Jul 28, 2026
5943294
Add specimen reference to genomic data file profile
khalifa-aly Jul 28, 2026
af6cee7
removing the specimen extension
khalifa-aly Aug 21, 2026
01cc173
removing SpecimenAssessedReference extension
khalifa-aly Aug 21, 2026
b3e938f
adding Speciment to related context
khalifa-aly Aug 21, 2026
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
1 change: 1 addition & 0 deletions input/fsh/CGExtensions.fsh
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -66,3 +66,4 @@ Description: "Used to identify the sample ancestry group using terms obtained fr
* ^context[+].type = #element
* ^context[=].expression = "Observation.component"
* value[x] only CodeableConcept

3 changes: 2 additions & 1 deletion input/fsh/CGGeneral.fsh
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -147,5 +147,6 @@ Parent: DocumentReference
Id: genomic-data-file
Title: "Genomic Data File"
Description: "A profile of DocumentReference used to represent a genomics file."
* context.related only Reference(GenomicReport)
* context.related only Reference(GenomicReport or Specimen)
* description ^short = "Human-readable description to provide guidance on how the file was generated"