Compress and SaveForecast with R2D2v3 - #790

Merged

Dooruk merged 98 commits into

feature/save_tasks/save_forecast

Aug 18, 2026

Commits on Dec 15, 2025

write out exceptions
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cb9c947
minor changes, make TUI message clearer
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c1f7119
changes in moving files between forecast cycles
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3ca20c4
take out the linking task
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10ff584
introduce simplified coupled tasks assuming direct execution of GEOS via Cylc
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79e6153
forecast suite changes
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b573f10
revamp files, more changes underway
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a1fd030
define new coupled model only suite
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55aeb11
change forecast location and make forecast a static folder
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4c8b9a3

Commits on Dec 18, 2025

format and code suggestions
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2f8ed47
document and codestring
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f44ec97

Commits on Jan 26, 2026

dont except exception, send exception type to logger
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c02bf4d
background error new form
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e872e38

Commits on Feb 2, 2026

get rid off deprecated keys
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2aab229
let go off catching exceptions
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a35440d
Merge branch 'develop' into feature/exec_geos_direct_part1
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4454c92

Commits on Feb 3, 2026

revert genB to original
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1008a81
get rid of unused keys, create alternative method (R2D2, albeit inactive) for obtaining restarts
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d6e5b99
minor changes to keep up with PRs
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d081529
changes related to initial restarts
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14de66a
first model specific task
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c898ab1
Merge branch 'develop' into feature/exec_geos_direct_part1
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4facad7
code style fixes
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3ad2722

Commits on Feb 4, 2026

adapt to new obs handling
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1d71e1e
skip save_restart while figuring R2D2 out
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eb4383a
deprecated keys related changes and few fixes
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6dc3825

Commits on Feb 5, 2026

some changes for geosv12
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23577cf
changes in geos class utility for geos v12
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bad345f
changes for 3dvar_cycle to test get, prep and run
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c03d9ac

Commits on Feb 10, 2026

make forecast_geos use new method
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68cea55
few fixes, stop using adjacent cycle
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e6b5643
clarify homdir expdir logic
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cfd44be
netcdf specify
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3adf0d7
Merge branch 'develop' into feature/exec_geos_direct_part1
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b9a9a47

Commits on Feb 12, 2026

better statement
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c2317a3
take out model specific approach from this PR
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ba29005
apply minor code improvements
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33a968c
Merge branch 'develop' into feature/exec_geos_direct_part1
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23bc8a5
Merge branch 'feature/exec_geos_direct_part1' into feature/exec_geos_direct_part2
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f2e787d
rename suites, take out obsolete parts and tasks
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60b13c5

Commits on Feb 13, 2026

add docstrings and proper naming for tasks as forecast directory is not erased
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2cffb0f
version bump
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b5b61da

Commits on Feb 18, 2026

suite changes with new task names
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3149f05
code improvements
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dbe0a3f

Commits on Feb 20, 2026

make mom6_iau model dependent
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7a2ad5f
cycle times hack
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f24cd0a
make experiment.yaml non-alphabetical again by using default ruamel
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5094cda
relevant for experiment.yaml
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022287b
minor fix for MOM6 IAU
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53ede0e
cycle times and overrride fixes
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714ecfe
add tier2 cycling run
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c88b448
Merge branch 'develop' into feature/exec_geos_direct_part2
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01905d5

Commits on Feb 23, 2026

observation changes for new gdas_marine obs
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8127f55
take csh out, add more observers for tier2
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6ec5a39
experiment.yaml original order
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fa72657
observation yaml, calculate obserror in timeseries
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d5b6221
tier2 in 3dvar_marine_cycle
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01b13b7
update documentation and add another example
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afa338e
erase obsolete tasks
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2063efa
marine suite configs homdir location
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0436b08
include hotstart option for model runs, take out unnecessary questions
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3f82f8e
fix platform defaults
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25ca9ee
Merge branch 'feature/exec_geos_direct_part2' into feature/exec_geos_direct_part3
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5396d0b
erase obsolete methods, add docstrings
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ef63eed
pycodestyle
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b0e948d
erase window_offset
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0fdc3db
last changes
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5d59260

Commits on Feb 25, 2026

minor fixes
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70d2c9b
another minot fix
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6057a4b

Commits on Feb 26, 2026

save forecast with r2d2 option only
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4949606
save forecast peripheries
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488f5d8

Commits on Mar 2, 2026

add store for cf and nwp
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0fb4c86

Commits on Mar 9, 2026

fix forecast conflicts
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c65900e
Merge branch 'develop' into feature/save_tasks/save_forecast
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e84c08d

Commits on Mar 11, 2026

conflict fix
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a17a044
Merge branch 'develop' into feature/save_tasks/save_forecast
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4c3bf14

Commits on May 18, 2026

fix save forecast to work with develop
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13134b0

Commits on Jun 10, 2026

Merge branch 'develop' into feature/save_tasks/save_forecast
Dooruk
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7b842b4

Commits on Jun 12, 2026

suite config and flow changes to save forecast
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105d4f6

Commits on Jun 24, 2026

use r2d2_experiment_id for store
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43b072b
Merge branch 'develop' into feature/save_tasks/save_forecast
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ce240ed

Commits on Jun 25, 2026

use tar.gz to store, take one
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a8c61af

Commits on Jul 21, 2026

Merge branch 'develop' into feature/save_tasks/save_forecast
Dooruk
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16a46ef

Commits on Aug 3, 2026

Merge branch 'develop' into feature/save_tasks/save_forecast
Dooruk
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0b767b0

Commits on Aug 6, 2026

Commits on Aug 10, 2026

create two separate tasks for compressing and storing, as R2D2 doesn't run on compute node
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5d0a895
compress utility update
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61f4c4d
Merge branch 'develop' into feature/save_tasks/save_forecast
Dooruk
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e2396ae
handle geos_marine background archives separately
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63c5521
workflow and codestyle fixes
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3f174f0
final changes, addressing code test issues
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7859ad9
change pyproject version
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029ce47

Commits on Aug 17, 2026

Merge branch 'develop' into feature/save_tasks/save_forecast
Dooruk
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205b986

Commits on Aug 18, 2026

use stored background
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d579d22
Merge branch 'develop' into feature/save_tasks/save_forecast
Dooruk
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dc0f8f7