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20 changes: 14 additions & 6 deletions src/toil/cwl/cwltoil.py
Original file line number Diff line number Diff line change
Expand Up @@ -2636,15 +2636,23 @@ def __init__(
# If not using the Toil file store, output files just go directly to
# their final homes their space doesn't need to be accounted per-job.

options_dict: dict = {} # type: ignore
run_local: bool = self.conditional.is_false(cwljob)
if not run_local:
options_dict["cores"] = req["cores"]
options_dict["memory"] = memory
options_dict["disk"] = int(total_disk)
options_dict["accelerators"] = accelerators
options_dict["preemptible"] = preemptible

super().__init__(
cores=req["cores"],
memory=memory,
disk=int(total_disk),
accelerators=accelerators,
preemptible=preemptible,
tool_id=self.cwltool.tool["id"],
parent_name=parent_name,
local=isinstance(tool, cwltool.command_line_tool.ExpressionTool),
local=(
isinstance(tool, cwltool.command_line_tool.ExpressionTool)
or run_local
),
**options_dict,
)

self.cwljob = cwljob
Expand Down