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Rory Covariate Functions - #50

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rdjmacklin wants to merge 119 commits into

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rory-landcover

Open

Rory Covariate Functions#50
rdjmacklin wants to merge 119 commits into
mainfrom
rory-landcover

Commits on Mar 18, 2026
- Documentation and code for data_fmt, data_buff, landcover_download, and associated checks.
  rdjmacklin
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  86fb8bc
- Update documentation and code for data_fmt, data_buff, landcover_download. Add documentation and code for landcover_extract. Begin tests for data_fmt.
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Commits on Mar 20, 2026
- Build more tests for data_fmt
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- Formatting edits to code and mans, finish tests for data_fmt, start tests for data_buff
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Commits on Mar 23, 2026
- March 23 2026: finish tests for data_buff, landcover_download, start tests for landcover_extract. Add nc_covariate_table().
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- March 23 2026: small edits to landcover_extract, first tests.
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Commits on Mar 25, 2026
- Finish tests for landcover_extract(), fix to landcover_extract() to make sure NA returned for out of range points, man for nc_covariate_table
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- Starting covariate formatting vignette
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Commits on Mar 26, 2026
Commits on Apr 1, 2026
- Integrate Steffi's changes
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- Fix problems identified by pkgdown check
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- Merge branch 'main' into rory-landcover
  rdjmacklin
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Commits on Apr 9, 2026
Commits on Apr 23, 2026
- Apr 23 2026: Upgrade landcover_download to only download data years rather than the entire timeseries between min data year and max data year.
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Commits on May 27, 2026
- May 27 2026: implement function and docs for vegetation_download and vegetation_extract, start tests.
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Commits on May 28, 2026
- May 28, 2026: finish vegetation tests, go back to tweak landcover tests - still not working. Check L403 and L410.
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Commits on May 29, 2026
- May 29, 2026: repair landcover tests
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Commits on May 30, 2026
- May 30, 2026: tweaks to download process for vegetation_download and matching process for vegetation_extract and corresponding changes to tests. Add vignette for vegetation. Correct errors in vigne…
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Commits on Jun 2, 2026
- June 2 2026: Fixes after review with Steffi
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Commits on Jun 3, 2026
- June 3, 2026: small fixes following R-CMD-CHECK
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- June 3, 2026: precompile vignettes
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- June 3, 2026: more fixes for R-CMD-CHECK
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- June 3, 2026: incorporate elevation functions.
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Commits on Jun 4, 2026
- June 4, 2026: changes to warnings.
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- June 4, 2026: More fiddly tests for landcover and vegetation.
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- June 4, 2026: more weird fixes.
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Commits on Jun 7, 2026
- June 5, 2026: messing with tests for bad credentials without much success. Other small fixes.
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Commits on Jun 8, 2026
- June 8, 2026: changes regarding verbosity and credential checking following updates to luna.
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- June 6, 2026: more verbosity fixes
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Commits on Jun 9, 2026
- June 6, 2026: adjust verbosity options, adjust warning system in elevation_extract(), and add tests for elevation functions.
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- June 9, 2026: elevation vignette
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Commits on Jun 10, 2026
- June 10, 2026: add elevation vignette to _pkgdown.yml
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- June 10, 2026: add worldclim functions, man, and tests
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Commits on Jun 11, 2026
- June 11, 2026: more WorldClim tests
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Commits on Jun 14, 2026
Commits on Jun 15, 2026
- June 15, 2026: try switching to worldclim_wind in examples to try to fix large file size warning in pkgdown
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Commits on Jun 16, 2026
- June 15, 2026: add scanfi download and update to SCANFI v2
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Commits on Jun 21, 2026
- June 21, 2026: small fixes to scanfi_download().
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Commits on Jun 22, 2026
- June 22, 2026: add scanfi_extract(), tweaks to scanfi_download and mans for other functions.
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Commits on Jun 25, 2026
- June 24, 2026: add tests for scanfi functions and fix as needed
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- June 24, 2026: apply AIR formatter
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Commits on Jun 27, 2026
- June 26, 2026: finish tests for scanfi functions.
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Commits on Jun 28, 2026
- June 28, 2026: update man pages w correct citation.
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- June 28th, 2026: vignette for scanfi functions + small fix.
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Commits on Jun 30, 2026
- June 29, 2026: complete rework of daymet_ functions.
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- June 30, 2026: tests and fixes for daymet_ functions.
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Commits on Jul 2, 2026
- July 2, 2026: vignette for daymet_ functions and a few other changes.
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Commits on Jul 3, 2026
Commits on Jul 23, 2026
- July 23, 2026: testing R CMD Check fixes after chatting w Steffi.
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- July 23, 2026: more R CMD Check fixes
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Commits on Aug 1, 2026
Commits on Aug 2, 2026
Commits on Aug 6, 2026
- August 6, 2026: small changes to address terra issue and example error.
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Commits on Aug 7, 2026
- Add manual trigger to action
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Commits on Aug 11, 2026
- August 11. 2026: fix missing dplyr:: in covariate merging tests.
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- August 11, 2026: merge workflow_dispatch
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Commits on Aug 13, 2026
Commits on Aug 15, 2026
Commits on Aug 16, 2026
- August 15, 2026: add multiple functions to daymet_extract(). Update man pages and tests.
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Commits on Aug 19, 2026
- August 19, 2026: add handling for fun = 'frac' when only one value present.
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Commits on Aug 21, 2026
- August 20, 2026: add helper function create_SAI() and implement across *_extract() functions.
  rdjmacklin
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- Merge branch 'main' into rory-landcover
  rdjmacklin
  authored
  3fe7090
Commits on Aug 26, 2026
- August 26, 2026: add nalcms_download().
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- Merge branch 'rory-landcover' of https://github.com/BirdsCanada/naturecounts into rory-landcover
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Commits on Aug 29, 2026
Commits on Aug 30, 2026
- August 30, 2026: add tests and misc fixes for nalcms_ functions.
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Commits on Aug 31, 2026
Commits on Sep 1, 2026
- August 31, 2026: r cmd fixes.
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- Danielle testing branch edit.
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Commits on Sep 3, 2026
Commits on Sep 9, 2026
Commits on Sep 11, 2026
Commits on Sep 13, 2026
- September 13, 2026: add skips across all tests.
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- September 13, 2026: import methods package
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