I’m looking for a pretrained model that I can use to generate the perturbed cell state in response to genetic/chemical perturbations (using any small molecule), and I came across CPA/ChemCPA.
I just wanted to confirm whether CPA or ChemCPA is i) a training framework that I need to use to train models using my dataset(s), or ii) something that offers pretrained models that I can either use directly (zero-shot) or after minimal fine-tuning for predictions on my datasets. Based on my understanding, it is the former, but I’d appreciate it if you could confirm.
I’m looking for a pretrained model that I can use to generate the perturbed cell state in response to genetic/chemical perturbations (using any small molecule), and I came across CPA/ChemCPA.
I just wanted to confirm whether CPA or ChemCPA is i) a training framework that I need to use to train models using my dataset(s), or ii) something that offers pretrained models that I can either use directly (zero-shot) or after minimal fine-tuning for predictions on my datasets. Based on my understanding, it is the former, but I’d appreciate it if you could confirm.