When using the pydeseq2, why is LFC shrinkage not performed?

[langbinga]

Description of feature

Hello, thank you for developing such an amazing tool for single-cell perturbation experiment analysis, pertpy. I have a question: when using the pydeseq2 library encapsulated in pertpy for differential expression analysis with the tutorial example data, why is LFC shrinkage not performed? Thank you for your response.

[Zethson]

Thank you for the kind words!
I don't think I have a very good reason for that. If you think it would be helpful to show, I'd welcome a pull request on https://github.com/theislab/pertpy-tutorials.

Thank you!