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‎index.md‎

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SPARQLing Plant Metabolic Pathways Wiki
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=============================================================================================
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[HOME](https://bigcat-um.github.io/SPARQLTutorialBioSB2019/)
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[Tutorial Pages](https://pathway-lod.github.io/SPARQLTutorials/)
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Program
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---------
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[PlantMetWiki webserver](https://plantmetwiki.bioinformatics.nl/)
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This workshop consists out of four parts:
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Index
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---------
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* 30 minutes: Introduction to RDF and SPARQL ([presentation](/Presentation_introRDF.pdf))
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* Introduction to RDF and SPARQL by BiGCaT Maastricht University ([presentation](/Presentation_introRDF.pdf))
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* 25 minutes: Gene variants in Wikidata:
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* [Understanding the Basics](Assignments/assignment1A.md)
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* [Execute the query and retain results](Assignments/assignment1B.md)
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* More information on where to find Biological and Chemical properties (aka relationships) to expand your query.
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* More detailed explanation of the SERVICE statement (since this is not directly part of SPARQL, but constructed by Wikidata for easier querying).
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The material for this workshop is available under [CC-BY-SA 4.0 International](https://creativecommons.org/licenses/by-sa/4.0/legalcode) licence.
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<!--- This website includes the workshop material for the [BioSB conference BreakOut Session](https://www.bigcat.unimaas.nl/sparqling-biology-breakout-session-at-biosb-2019/)

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