diff --git a/Cellpose_parallel.ipynb b/Cellpose_parallel.ipynb index 7e3f479..3a31467 100644 --- a/Cellpose_parallel.ipynb +++ b/Cellpose_parallel.ipynb @@ -89,7 +89,7 @@ "metadata": {}, "outputs": [], "source": [ - "ENPOINT_URL = 'https://uk1s3.embassy.ebi.ac.uk/'" + "ENPOINT_URL = 'https://livingobjects.ebi.ac.uk/'" ] }, { @@ -434,7 +434,7 @@ "## Cellpose and BIA data\n", "\n", "Using ome-zarr for both IDR and BIA allows us to use the same analytical pipeline on data stored in two different resources.\n", - "We will run Cellpose against an [image](https://uk1s3.embassy.ebi.ac.uk/bia-integrator-data/pages/S-BIAD338/804b2976-1111-4099-8bfc-21d1d1d2163c.html) in BIA associated with the study with accession number [S-BIAD338]( https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD338)" + "We will run Cellpose against an [image](https://livingobjects.ebi.ac.uk/bia-integrator-data/pages/S-BIAD338/804b2976-1111-4099-8bfc-21d1d1d2163c.html) in BIA associated with the study with accession number [S-BIAD338]( https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD338)" ] }, { @@ -444,7 +444,7 @@ "source": [ "### Lazy Loading of data\n", "\n", - "To find the name, go to https://uk1s3.embassy.ebi.ac.uk/bia-integrator-data/pages/S-BIAD338/804b2976-1111-4099-8bfc-21d1d1d2163c.html. Click on ``Copy S3 URI to clipboard``, paste it here or into a text editor and remove the endpoint, i.e. the https://uk1s3.embassy.ebi.ac.uk." + "To find the name, go to https://livingobjects.ebi.ac.uk/bia-integrator-data/pages/S-BIAD338/804b2976-1111-4099-8bfc-21d1d1d2163c.html. Click on ``Copy S3 URI to clipboard``, paste it here or into a text editor and remove the endpoint, i.e. the https://livingobjects.ebi.ac.uk." ] }, { diff --git a/Reading_zarr_images.ipynb b/Reading_zarr_images.ipynb index 9d273fb..e1ad3fc 100644 --- a/Reading_zarr_images.ipynb +++ b/Reading_zarr_images.ipynb @@ -113,7 +113,7 @@ "metadata": {}, "outputs": [], "source": [ - "ENPOINT_URL = 'https://uk1s3.embassy.ebi.ac.uk/'" + "ENPOINT_URL = 'https://livingobjects.ebi.ac.uk/'" ] }, {