From 4e87b2deee611499f2e6e1b2aefffb42d87804f8 Mon Sep 17 00:00:00 2001 From: mite-bot Date: Wed, 6 May 2026 16:10:20 +0200 Subject: [PATCH 1/5] Add submission UUID file --- .../05ee8c02-4955-11f1-9ef6-bb4e59819b6d.json | 44 +++++++++++++++++++ 1 file changed, 44 insertions(+) create mode 100644 mite_data/data/05ee8c02-4955-11f1-9ef6-bb4e59819b6d.json diff --git a/mite_data/data/05ee8c02-4955-11f1-9ef6-bb4e59819b6d.json b/mite_data/data/05ee8c02-4955-11f1-9ef6-bb4e59819b6d.json new file mode 100644 index 000000000..530b0ad11 --- /dev/null +++ b/mite_data/data/05ee8c02-4955-11f1-9ef6-bb4e59819b6d.json @@ -0,0 +1,44 @@ +{ + "accession": "MITE9999999", + "status": "pending", + "changelog": [ + { + "version": "1", + "date": "2026-05-06", + "contributors": [ + "0000-0002-0771-9611" + ], + "reviewers": [ + "BBBBBBBBBBBBBBBBBBBBBBBB" + ], + "comment": "New entry." + } + ], + "enzyme": { + "name": "dpchG", + "databaseIds": { + "uniprot": "UPI000249F075", + "genpept": "" + }, + "references": [ + "doi:" + ] + }, + "reactions": [ + { + "evidence": { + "evidenceCode": [], + "references": [ + "doi:" + ] + }, + "reactions": [ + { + "products": [ + "" + ] + } + ] + } + ] +} \ No newline at end of file From eab1fc602b70a939e2ee5a1ac5daa8d5dd92d124 Mon Sep 17 00:00:00 2001 From: mite-bot Date: Wed, 6 May 2026 16:14:38 +0200 Subject: [PATCH 2/5] Update submission --- .../05ee8c02-4955-11f1-9ef6-bb4e59819b6d.json | 43 +++++++++++++------ 1 file changed, 29 insertions(+), 14 deletions(-) diff --git a/mite_data/data/05ee8c02-4955-11f1-9ef6-bb4e59819b6d.json b/mite_data/data/05ee8c02-4955-11f1-9ef6-bb4e59819b6d.json index 530b0ad11..4db8080f7 100644 --- a/mite_data/data/05ee8c02-4955-11f1-9ef6-bb4e59819b6d.json +++ b/mite_data/data/05ee8c02-4955-11f1-9ef6-bb4e59819b6d.json @@ -1,6 +1,7 @@ { "accession": "MITE9999999", "status": "pending", + "comment": "CH63R_05477", "changelog": [ { "version": "1", @@ -16,29 +17,43 @@ ], "enzyme": { "name": "dpchG", + "description": "Short chain dehydrogenase/reductase", + "references": [ + "doi:10.1038/s41467-020-15664-4" + ], "databaseIds": { - "uniprot": "UPI000249F075", - "genpept": "" + "uniprot": "UPI000249F075" }, - "references": [ - "doi:" - ] + "cofactors": { + "organic": [ + "NADP" + ] + } }, "reactions": [ { - "evidence": { - "evidenceCode": [], - "references": [ - "doi:" - ] - }, + "tailoring": [ + "Oxidation" + ], + "description": "Oxidation of the 8S hydroxy group to a ketone.", + "reactionSMARTS": "C=C1CC[C@@H]2[C@](C)(CC[C@H](O)[C@@]2(C)CCC=C(C)C)[C@@H]1Cc1c(O)c(C)c(C)oc1=O>>C=C1CC[C@@H]2[C@](C)(CCC(=O)[C@@]2(C)CCC=C(C)C)[C@@H]1Cc1c(O)c(C)c(C)oc1=O", "reactions": [ { + "substrate": "C=C1CC[C@@H]2[C@](C)(CC[C@H](O)[C@@]2(C)CCC=C(C)C)[C@@H]1Cc1c(O)c(C)c(C)oc1=O", "products": [ - "" - ] + "C=C1CC[C@@H]2[C@](C)(CCC(=O)[C@@]2(C)CCC=C(C)C)[C@@H]1Cc1c(O)c(C)c(C)oc1=O" + ], + "isIntermediate": false } - ] + ], + "evidence": { + "evidenceCode": [ + "Heterologous expression" + ], + "references": [ + "doi:10.1038/s41467-020-15664-4" + ] + } } ] } \ No newline at end of file From ca5320921bc1312e7843312221a8e486de2381a1 Mon Sep 17 00:00:00 2001 From: mite-bot Date: Wed, 22 Jul 2026 17:24:55 +0200 Subject: [PATCH 3/5] Delete mite_data/data/05ee8c02-4955-11f1-9ef6-bb4e59819b6d.json --- .../05ee8c02-4955-11f1-9ef6-bb4e59819b6d.json | 59 ------------------- 1 file changed, 59 deletions(-) delete mode 100644 mite_data/data/05ee8c02-4955-11f1-9ef6-bb4e59819b6d.json diff --git a/mite_data/data/05ee8c02-4955-11f1-9ef6-bb4e59819b6d.json b/mite_data/data/05ee8c02-4955-11f1-9ef6-bb4e59819b6d.json deleted file mode 100644 index 4db8080f7..000000000 --- a/mite_data/data/05ee8c02-4955-11f1-9ef6-bb4e59819b6d.json +++ /dev/null @@ -1,59 +0,0 @@ -{ - "accession": "MITE9999999", - "status": "pending", - "comment": "CH63R_05477", - "changelog": [ - { - "version": "1", - "date": "2026-05-06", - "contributors": [ - "0000-0002-0771-9611" - ], - "reviewers": [ - "BBBBBBBBBBBBBBBBBBBBBBBB" - ], - "comment": "New entry." - } - ], - "enzyme": { - "name": "dpchG", - "description": "Short chain dehydrogenase/reductase", - "references": [ - "doi:10.1038/s41467-020-15664-4" - ], - "databaseIds": { - "uniprot": "UPI000249F075" - }, - "cofactors": { - "organic": [ - "NADP" - ] - } - }, - "reactions": [ - { - "tailoring": [ - "Oxidation" - ], - "description": "Oxidation of the 8S hydroxy group to a ketone.", - "reactionSMARTS": "C=C1CC[C@@H]2[C@](C)(CC[C@H](O)[C@@]2(C)CCC=C(C)C)[C@@H]1Cc1c(O)c(C)c(C)oc1=O>>C=C1CC[C@@H]2[C@](C)(CCC(=O)[C@@]2(C)CCC=C(C)C)[C@@H]1Cc1c(O)c(C)c(C)oc1=O", - "reactions": [ - { - "substrate": "C=C1CC[C@@H]2[C@](C)(CC[C@H](O)[C@@]2(C)CCC=C(C)C)[C@@H]1Cc1c(O)c(C)c(C)oc1=O", - "products": [ - "C=C1CC[C@@H]2[C@](C)(CCC(=O)[C@@]2(C)CCC=C(C)C)[C@@H]1Cc1c(O)c(C)c(C)oc1=O" - ], - "isIntermediate": false - } - ], - "evidence": { - "evidenceCode": [ - "Heterologous expression" - ], - "references": [ - "doi:10.1038/s41467-020-15664-4" - ] - } - } - ] -} \ No newline at end of file From fbe92fd79c2b31361d3dc35e07b493e70a1a0b33 Mon Sep 17 00:00:00 2001 From: mite-bot Date: Wed, 22 Jul 2026 17:24:56 +0200 Subject: [PATCH 4/5] Add submission --- mite_data/data/MITE9999999.json | 59 +++++++++++++++++++++++++++++++++ 1 file changed, 59 insertions(+) create mode 100644 mite_data/data/MITE9999999.json diff --git a/mite_data/data/MITE9999999.json b/mite_data/data/MITE9999999.json new file mode 100644 index 000000000..814326d00 --- /dev/null +++ b/mite_data/data/MITE9999999.json @@ -0,0 +1,59 @@ +{ + "accession": "MITE9999999", + "status": "active", + "comment": "SDR-mediated oxidation of the 8S hydroxy group to a ketone in higginsianin biosynthesis", + "changelog": [ + { + "version": "1", + "date": "2026-05-06", + "contributors": [ + "0000-0002-0771-9611" + ], + "reviewers": [ + "0000-0002-4540-6501" + ], + "comment": "UniPort ID changed" + } + ], + "enzyme": { + "name": "dpchG", + "description": "Short chain dehydrogenase/reductase", + "references": [ + "doi:10.1038/s41467-020-15664-4" + ], + "databaseIds": { + "uniprot": "H1VN83" + }, + "cofactors": { + "organic": [ + "NADP" + ] + } + }, + "reactions": [ + { + "tailoring": [ + "Oxidation" + ], + "description": "SDR-mediated oxidation of the 8S hydroxy group to a ketone in higginsianin biosynthesis", + "reactionSMARTS": "C=C1CC[C@@H]2[C@](C)(CC[C@H](O)[C@@]2(C)CCC=C(C)C)[C@@H]1Cc1c(O)c(C)c(C)oc1=O>>C=C1CC[C@@H]2[C@](C)(CCC(=O)[C@@]2(C)CCC=C(C)C)[C@@H]1Cc1c(O)c(C)c(C)oc1=O", + "reactions": [ + { + "substrate": "C=C1CC[C@@H]2[C@](C)(CC[C@H](O)[C@@]2(C)CCC=C(C)C)[C@@H]1Cc1c(O)c(C)c(C)oc1=O", + "products": [ + "C=C1CC[C@@H]2[C@](C)(CCC(=O)[C@@]2(C)CCC=C(C)C)[C@@H]1Cc1c(O)c(C)c(C)oc1=O" + ], + "isIntermediate": true + } + ], + "evidence": { + "evidenceCode": [ + "Heterologous expression" + ], + "references": [ + "doi:10.1038/s41467-020-15664-4" + ] + } + } + ] +} \ No newline at end of file From 8197c368df66e8ac416cbf8ee276cd76697a3db0 Mon Sep 17 00:00:00 2001 From: "Mitja M. Zdouc" <95709447+mmzdouc@users.noreply.github.com> Date: Thu, 1 Oct 2026 13:32:34 +0200 Subject: [PATCH 5/5] Update and rename MITE9999999.json to MITE0000487.json --- mite_data/data/{MITE9999999.json => MITE0000487.json} | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) rename mite_data/data/{MITE9999999.json => MITE0000487.json} (94%) diff --git a/mite_data/data/MITE9999999.json b/mite_data/data/MITE0000487.json similarity index 94% rename from mite_data/data/MITE9999999.json rename to mite_data/data/MITE0000487.json index 814326d00..84775054b 100644 --- a/mite_data/data/MITE9999999.json +++ b/mite_data/data/MITE0000487.json @@ -1,5 +1,5 @@ { - "accession": "MITE9999999", + "accession": "MITE0000487", "status": "active", "comment": "SDR-mediated oxidation of the 8S hydroxy group to a ketone in higginsianin biosynthesis", "changelog": [ @@ -12,7 +12,7 @@ "reviewers": [ "0000-0002-4540-6501" ], - "comment": "UniPort ID changed" + "comment": "New entry. Reviewer 1 changed UniPort ID." } ], "enzyme": { @@ -56,4 +56,4 @@ } } ] -} \ No newline at end of file +}