diff --git a/tools/pgxRpi/.shed.yml b/tools/pgxRpi/.shed.yml index 8db6ab2ad33..3a685795aa6 100644 --- a/tools/pgxRpi/.shed.yml +++ b/tools/pgxRpi/.shed.yml @@ -7,4 +7,19 @@ long_description: | remote_repository_url: https://github.com/galaxyproject/tools-iuc/tree/main/tools/pgxRpi type: unrestricted categories: -- Variant Analysis \ No newline at end of file +- Variant Analysis + +auto_tool_repositories: + name_template: "{{ tool_id }}" + description_template: "pgxRpi: {{ tool_name }}" + +suite: + name: "pgxrpi_suite" + description: "A suite of Galaxy tools for accessing and visualizing Progenetix genomic variation data via the Beacon v2 API" + + long_description: | + pgxRpi is an R wrapper package for the Progenetix REST API that leverages the capabilities of the Beacon v2 specification. It also provides functions to enhance the visualisation of the retrieved genomic variation data. + + This suite includes: + - **pgx_loader**: Load various data from Progenetix database via the Beacon v2 API + - **pgx_freqplot**: Plot the frequency of copy number variation in specific cohorts