diff --git a/communities/imaging/lab/sections/2_tools.yml b/communities/imaging/lab/sections/2_tools.yml index 91dbd756..3e717631 100644 --- a/communities/imaging/lab/sections/2_tools.yml +++ b/communities/imaging/lab/sections/2_tools.yml @@ -108,13 +108,20 @@ tabs: - datatypes: - data button_link: "{{ galaxy_base_url }}/root?tool_id=interactive_tool_anylabeling" - - title_md: interactive_tool_ilastik + - title_md: interactive_tool_bellavista description_md: > - Interactive machine learning and segmentation toolkit + Interactive data exploration inputs: - datatypes: - data - button_link: "{{ galaxy_base_url }}/root?tool_id=interactive_tool_ilastik" + button_link: "{{ galaxy_base_url }}/root?tool_id=interactive_tool_bellavista" + - title_md: interactive_tool_cellpose + description_md: > + Tool for cell and nucleus segmentation + inputs: + - datatypes: + - data + button_link: "{{ galaxy_base_url }}/root?tool_id=interactive_tool_cellpose" - title_md: interactive_tool_cellprofiler description_md: > Image analysis software for identifying and quantifying cell phenotypes @@ -122,11 +129,31 @@ tabs: - datatypes: - data button_link: "{{ galaxy_base_url }}/root?tool_id=interactive_tool_cellprofiler" + - title_md: interactive_tool_cellxgene + description_md: > + Tool to deploy browser for visualization of single cell RNAseq data + inputs: + - datatypes: + - data + button_link: "{{ galaxy_base_url }}/root?tool_id=interactive_tool_cellxgene" + - title_md: interactive_tool_ilastik + description_md: > + Interactive machine learning and segmentation toolkit + inputs: + - datatypes: + - data + button_link: "{{ galaxy_base_url }}/root?tool_id=interactive_tool_ilastik" - title_md: interactive_tool_napari description_md: > - interactive tool + Interactive data exploration inputs: - datatypes: - data button_link: "{{ galaxy_base_url }}/root?tool_id=interactive_tool_napari" - + - title_md: interactive_tool_qupath + description_md: > + Interactive tool for quantification of electrophoresis gel bands + inputs: + - datatypes: + - data + button_link: "{{ galaxy_base_url }}/root?tool_id=interactive_tool_qupath"