snv-post-processing/modules.json at main · Ferlab-Ste-Justine/snv-post-processing · GitHub

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{
    "name": "Ferlab-Ste-Justine/snv-post-processing",
    "homePage": "https://github.com/Ferlab-Ste-Justine/snv-post-processing",
    "repos": {
        "https://github.com/nf-core/modules.git": {
            "modules": {
                "nf-core": {
                    "bcftools/annotate": {
                        "branch": "master",
                        "git_sha": "feef37435aea56816adf4b3bde1fc76aac327a8d",
                        "installed_by": ["modules"]
                    },
                    "bcftools/filter": {
                        "branch": "master",
                        "git_sha": "feef37435aea56816adf4b3bde1fc76aac327a8d",
                        "installed_by": ["modules"]
                    },
                    "bcftools/norm": {
                        "branch": "master",
                        "git_sha": "feef37435aea56816adf4b3bde1fc76aac327a8d",
                        "installed_by": ["modules"]
                    },
                    "bcftools/pluginfixploidy": {
                        "branch": "master",
                        "git_sha": "feef37435aea56816adf4b3bde1fc76aac327a8d",
                        "installed_by": ["modules"]
                    },
                    "bcftools/view": {
                        "branch": "master",
                        "git_sha": "feef37435aea56816adf4b3bde1fc76aac327a8d",
                        "installed_by": ["modules"]
                    },
                    "ensemblvep/download": {
                        "branch": "master",
                        "git_sha": "f50d3c606dbc7e5af367cce070d824b796872ed2",
                        "installed_by": ["modules"]
                    },
                    "ensemblvep/vep": {
                        "branch": "master",
                        "git_sha": "b0bd00e83b18957bd409cd9e31e98b965ebc593b",
                        "installed_by": ["modules", "vcf_annotate_ensemblvep"]
                    },
                    "gatk4/genotypegvcfs": {
                        "branch": "master",
                        "git_sha": "d5de7a949aa84689f4098c958f05733a6c3804f5",
                        "installed_by": ["modules"]
                    },
                    "gatk4/variantfiltration": {
                        "branch": "master",
                        "git_sha": "d5de7a949aa84689f4098c958f05733a6c3804f5",
                        "installed_by": ["modules"]
                    },
                    "gatk4/variantrecalibrator": {
                        "branch": "master",
                        "git_sha": "d5de7a949aa84689f4098c958f05733a6c3804f5",
                        "installed_by": ["modules"]
                    }
                }
            },
            "subworkflows": {
                "nf-core": {
                    "utils_nextflow_pipeline": {
                        "branch": "master",
                        "git_sha": "d20fb2a9cc3e2835e9d067d1046a63252eb17352",
                        "installed_by": ["subworkflows"]
                    },
                    "utils_nfcore_pipeline": {
                        "branch": "master",
                        "git_sha": "2fdce49d30c0254f76bc0f13c55c17455c1251ab",
                        "installed_by": ["subworkflows"]
                    },
                    "utils_nfschema_plugin": {
                        "branch": "master",
                        "git_sha": "a7b27fd25bfa8dcc07d299e88bd790585901a436",
                        "installed_by": ["subworkflows"]
                    },
                    "vcf_annotate_ensemblvep": {
                        "branch": "master",
                        "git_sha": "b0bd00e83b18957bd409cd9e31e98b965ebc593b",
                        "installed_by": ["subworkflows"]
                    }
                }
            }
        }
    }
}