DESCRIPTION

Package: treescanr
Title: Tree-Based Scan Statistics for Syndromic Surveillance with 'TreeScan'
Version: 0.0.1
Authors@R: c(
    person("Nyall", "Jamieson", role = "aut",
      comment = "Author of the original epiENGAGE TreeScan pipeline"),
    person("Emily", "Javan", role = "aut"),
    person("Ramona", "Lall", role = "aut",
      comment = "Count file and signal linelist code (NYC Health Department)"),
    person("Alison", "Levin-Rector", role = "aut",
      comment = "Count file code, tree and not-evaluated node files (NYC Health Department)"),
    person("George G.", "Vega Yon", , "g.vegayon@gmail.com", role = c("aut", "cre")),
    person("Becky", "Wilson", role = "ctb"),
    person("Martin", "Kulldorff", role = "cph",
      comment = "Copyright holder of the TreeScan(TM) software, which is not distributed with this package")
    )
Description: A lightweight pipeline to prepare emergency department visit data,
    build incident-diagnosis count files, write parameter files, and run the
    'TreeScan' command-line software on ICD-10-CM trees. Ported from the
    epiENGAGE TreeScan implementation scripts.
License: MIT + file LICENSE
URL: https://github.com/EpiForeSITE/TreeScan, https://epiforesite.github.io/TreeScan/
BugReports: https://github.com/EpiForeSITE/TreeScan/issues
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
Depends: R (>= 4.1.0)
Imports:
    data.table,
    utils
Suggests:
    tinytest,
    quarto
VignetteBuilder: quarto
SystemRequirements: TreeScan (>= 2.4.1) command-line binary
    (https://www.treescan.org), Quarto (for vignettes)
Config/roxygen2/version: 8.0.0
Config/Needs/website: pkgdown